Giotto Suite is installed via R but there are required Python modules which must be installed in order for Giotto Suite to function properly. Below are the instructions for both the installation of the Giotto Suite package (Step 1) and required Python environment (Step 2).
R (>= 3.5.1)
Python (>= 3.0)
Step 1: Install Giotto Suite
Step 2: Install the Giotto Python environment
This step only needs to be run once. Giotto Suite will automatically detect the environment in the future.
Encountering errors? Checkout out the Troubleshooting page for installation help.
Try Giotto in the cloud#
To avoid installation issues, you can run Giotto analysis on Terra.bio. Take a look on the Terra tutorial.
Learn more about Giotto Suite#
The following tutorials use data which is stored within another package in the Giotto Suite ecosystem, GiottoData. To run these tutorials, please first install this small package.