calculateOverlapRaster#
Last Updated: Sep 07, 2023
Description#
calculate overlap between cellular structures (polygons) and features (points)
Usage#
calculateOverlapRaster(
gobject,
name_overlap = NULL,
spatial_info = NULL,
poly_ID_names = NULL,
feat_info = NULL,
feat_subset_column = NULL,
feat_subset_ids = NULL,
count_info_column = NULL,
return_gobject = TRUE,
verbose = TRUE
)
Arguments#
|
giotto object |
|
name for the overlap results (default to feat_info parameter) |
|
polygon information |
|
(optional) list of poly_IDs to use |
|
feature information |
|
feature info column to subset features with |
|
ids within feature info column to use for subsetting |
|
column with count information (optional) |
|
return giotto object (default: TRUE) |
|
be verbose |
Details#
Serial overlapping function.
Value#
giotto object or spatVector with overlapping information