Tutorials#

Most of these tutorials use data which is stored within a helper extension of Giotto Suite, GiottoData. To run these tutorials, please first install this small package. Please note that some of the tutorials do require a manual download from an external site.

devtools::install_github("drieslab/GiottoData")

Sequencing-based#

Stereo-seq#

Seq-Scope#

Visium#

RNA Multiplex Imaging#

Spatial Genomics#

Xenium#

Nanostring CosMx#

MERFISH#

Vizgen#

seqFISH#

osmFISH#

Resolve Biosciences#

Protein Multiplexing#

CODEX#

Single Cell RNA Sequencing#

Other Technologies#