Get polygon info#

Last Updated: Oct 02, 2023

Description#

Get giotto polygon spatVector

Usage#

get_polygon_info(
  gobject,
  polygon_name = NULL,
  polygon_overlap = NULL,
  return_giottoPolygon = FALSE
)

Arguments#

gobject

giotto object

polygon_name

name of polygons. Default “cell”

polygon_overlap

include polygon overlap information

return_giottoPolygon

(Defaults to FALSE) Return as giottoPolygon S4 object

See Also#

Other polygon info data accessor functions: set_polygon_info()

Other functions to get data from giotto object: get_NearestNetwork(), get_dimReduction(), get_expression_values(), get_feature_info(), get_giottoImage(), get_spatialGrid(), get_spatialNetwork(), get_spatial_enrichment(), get_spatial_locations()