Plot interaction changed features#
Last Updated: Jan 14, 2025
Description#
Create barplot to visualize interaction changed features
Usage#
plotICF(
gobject,
icfObject,
source_type,
source_markers,
ICF_feats,
cell_color_code = NULL,
show_plot = NA,
return_plot = NA,
save_plot = NA,
save_param = list(),
default_save_name = "plotICF"
)
Arguments#
|
giotto object |
|
ICF (interaction changed feature) score object |
|
cell type of the source cell |
|
markers for the source cell type |
|
named character vector of ICF features |
|
cell color code for the interacting cell types |
|
show plots |
|
return plotting object |
|
directly save the plot [boolean] |
|
list of saving parameters from
|
|
default save name for saving, don’t change, change save_name in save_param |
Value#
plot