set_expression_values#

Date

2022-10-06

https://github.com/drieslab/Giotto/tree/suite/R/accessors.R#L218

Description#

Function to set expression values for giotto object

Usage#

set_expression_values(
  gobject,
  spat_unit = NULL,
  feat_type = NULL,
  name = "test",
  values
)

Arguments#

Argument

Description

gobject

giotto object

spat_unit

spatial unit (e.g. “cellâ€)

feat_type

feature type (e.g. “rnaâ€, “dnaâ€, “proteinâ€)

name

name for the expression slot

values

matrix of expression values

Value#

giotto object

Seealso#

Other expression accessor functions: get_expression_values

Other functions to get data from giotto object:

get_NearestNetwork

get_dimReduction

get_feature_info

get_giottoImage

get_polygon_info

get_spatialGrid

get_spatialNetwork

get_spatial_locations