showSpatialCorFeats#
Last Updated: Sep 07, 2023
Description#
Shows and filters spatially correlated features
Usage#
showSpatialCorFeats(
spatCorObject,
use_clus_name = NULL,
selected_clusters = NULL,
feats = NULL,
min_spat_cor = 0.5,
min_expr_cor = NULL,
min_cor_diff = NULL,
min_rank_diff = NULL,
show_top_feats = NULL
)
Arguments#
|
spatial correlation object |
|
cluster information to show |
|
subset of clusters to show |
|
subset of features to show |
|
filter on minimum spatial correlation |
|
filter on minimum single-cell expression correlation |
|
filter on minimum correlation difference (spatial vs expression) |
|
filter on minimum correlation rank difference (spatial vs expression) |
|
show top features per gene |
Value#
data.table with filtered information