crossSectionPlot3D#
Last Updated: Nov 17, 2023
Description#
Visualize cells in a virtual cross section according to spatial coordinates
Usage#
crossSectionPlot3D(
gobject,
crossSection_obj = NULL,
name = NULL,
spatial_network_name = "Delaunay_network",
show_other_cells = T,
other_cell_color = alpha("lightgrey", 0),
default_save_name = "crossSection3D",
...
)
Arguments#
|
giotto object |
|
cross section object as alternative input. default = NULL. |
|
name of virtual cross section to use |
|
name of spatial network to use |
|
display not selected cells |
|
color of cells outside the cross section. default = transparent. |
|
default save name for saving, don’t change, change save_name in save_param |
|
parameters for spatPlot3D |
Details#
Description of parameters.
Value#
ggplot