Set spatial network#
Last Updated: Sep 07, 2023
Description#
Function to set a spatial network
Usage#
set_spatialNetwork(
gobject,
spat_unit = NULL,
name = NULL,
spatial_network,
verbose = TRUE,
set_defaults = TRUE
)
Arguments#
|
giotto object |
|
spatial unit (e.g. “cell”) |
|
name of spatial network |
|
spatial network |
|
be verbose |
|
set default spat_unit and feat_type. Change to FALSE only when expression and spat_info are not expected to exist. |
Value#
giotto object
See Also#
Other spatial network data accessor functions: get_spatialNetwork()
Other functions to set data in giotto object: get_cell_id()
,
get_feat_id()
, set_NearestNetwork()
, set_cell_id()
,
set_cell_metadata()
, set_dimReduction()
,
set_expression_values()
, set_feat_id()
, set_feature_info()
,
set_feature_metadata()
, set_giottoImage()
,
set_polygon_info()
, set_spatialGrid()
,
set_spatial_enrichment()
, set_spatial_locations()