clusterSpatialCorFeats#

Date

2022-10-06

https://github.com/drieslab/Giotto/tree/suite/R/spatial_genes.R#L3587

Description#

Cluster based on spatially correlated features

Usage#

clusterSpatialCorFeats(
  spatCorObject,
  name = "spat_clus",
  hclust_method = "ward.D",
  k = 10,
  return_obj = TRUE
)

Arguments#

Argument

Description

spatCorObject

spatial correlation object

name

name for spatial clustering results

hclust_method

method for hierarchical clustering

k

number of clusters to extract

return_obj

return spatial correlation object (spatCorObject)

Value#

spatCorObject or cluster results