combineSpatialCellFeatureInfo#
Last Updated: Oct 02, 2023
Description#
Combine spatial cell information (e.g. polygon) and spatial feature information (e.g. transcript locations)
Usage#
combineSpatialCellFeatureInfo(
gobject,
spat_unit = NULL,
feat_type = NULL,
selected_features = NULL
)
Arguments#
|
Giotto object |
|
spatial unit |
|
feature type(s) |
|
select set of features |
Details#
The returned data.table has the following columns:
sdimx: spatial feature location on the x-axis
sdimy: spatial feature location on the y-axis
feat_ID: unique feature ID
cell_ID: unique cell ID
used: how often was the feature used/assigned to a cell
feat: selected feature(s)
Value#
list of data.table(s)