makeSignMatrixDWLSfromMatrix#

Last Updated: Jan 29, 2024

Description#

Function to convert a single-cell RNAseq matrix into a format that can be used with runDWLSDeconv.

Usage#

makeSignMatrixDWLSfromMatrix(matrix, sign_gene, cell_type_vector)

Arguments#

matrix

scRNA-seq matrix

sign_gene

genes to use (e.g. marker genes)

cell_type_vector

vector with cell types (length = ncol(matrix))

Value#

matrix

See Also#

runDWLSDeconv