annotateSpatialGrid#

Last Updated: Mar 11, 2023

Description#

annotate spatial grid with cell ID and cell metadata (optional)

Usage#

annotateSpatialGrid(
  gobject,
  spat_unit = NULL,
  feat_type = NULL,
  spat_loc_name = "raw",
  spatial_grid_name = "spatial_grid",
  cluster_columns = NULL
)

Arguments#

`gobject`	Giotto object
`spat_unit`	spatial unit
`feat_type`	feature type
`spat_loc_name`	name of spatial locations
`spatial_grid_name`	name of spatial grid, see `showGiottoSpatGrids`
`cluster_columns`	names of cell metadata, see `pDataDT`

Value#

annotated spatial grid data.table