get_spatialNetwork#

Date

2022-10-06

https://github.com/drieslab/Giotto/tree/suite/R/accessors.R#L685

Description#

Function to get a spatial network

Usage#

get_spatialNetwork(
  gobject,
  spat_unit = NULL,
  name = NULL,
  return_network_Obj = FALSE
)

Arguments#

Argument

Description

gobject

giotto object

spat_unit

spatial unit (e.g. “cell?)

name

name of spatial network

return_network_Obj

return network object (default = FALSE)

Seealso#

Other spatial network data accessor functions: `set_spatialNetwork <#setspatialnetwork>`__

Other functions to get data from giotto object: `get_NearestNetwork <#getnearestnetwork>`__ , `get_dimReduction <#getdimreduction>`__ , `get_expression_values <#getexpressionvalues>`__ , `get_feature_info <#getfeatureinfo>`__ , `get_giottoImage <#getgiottoimage>`__ , `get_polygon_info <#getpolygoninfo>`__ , `get_spatialGrid <#getspatialgrid>`__ , `get_spatial_enrichment <#getspatialenrichment>`__ , `get_spatial_locations <#getspatiallocations>`__