plotICG#

Last Updated: Oct 02, 2023

Description#

Create barplot to visualize interaction changed features

plotICG(...)

...

Arguments passed on to plotICF

gobject: giotto object
icfObject: ICF (interaction changed feature) score object
source_type: cell type of the source cell
source_markers: markers for the source cell type
ICF_feats: named character vector of ICF features
cell_color_code: cell color code for the interacting cell types
show_plot: show plots
return_plot: return plotting object
save_plot: directly save the plot [boolean]
save_param: list of saving parameters from all_plots_save_function
default_save_name: default save name for saving, don’t change, change save_name in save_param